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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
4
total RNA-seq
3
small RNA-seq
2
DNase-seq
1
Hi-C
1
RRBS
1
WGBS
Assay category
7
Transcription
2
DNA accessibility
2
DNA methylation
1
3D chromatin structure
Date released
315
November, 2017
194
May, 2020
63
December, 2017
54
August, 2017
53
November, 2018
40
May, 2022
35
August, 2021
10
July, 2019
7
October, 2019
5
December, 2019
5
January, 2019
3
February, 2021
3
March, 2020
2
June, 2019
1
December, 2018
1
February, 2020
Available data
10
bigWig
9
bam
7
tsv
3
bed bed3+
2
bed broadPeak
2
bed narrowPeak
2
bigBed broadPeak
2
bigBed narrowPeak
1
bed bedMethyl
1
bigBed bedMethyl
1
hdf5
Organism
12
Homo sapiens
Biosample type
8
tissue
4
primary cell
Organ
92
kidney
60
heart
53
musculature of body
48
brain
37
limb
36
connective tissue
33
epithelium
19
vasculature
18
ureter
16
blood vessel
13
adipose tissue
12
liver
10
pancreas
8
eye
5
artery
2
pericardium
Project
12
AMP
Genome assembly (visualization)
11
hg19
9
GRCh38
Lab
12
AMP-T2D consortium
BIOSAMPLE
ASSAY
12 results
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total RNA-seq
small RNA-seq
DNase-seq
Hi-C
RRBS
WGBS
tissue
right lobe of liver
2
2
1
liver
2
1
primary cell
hepatocyte
1
1
endothelial cell of hepatic sinusoid
1
hepatic stellate cell
1
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