Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
9
DNase-seq
9
total RNA-seq
3
WGBS
3
small RNA-seq
2
ATAC-seq
2
Hi-C
2
RRBS
Assay category
12
Transcription
11
DNA accessibility
5
DNA methylation
2
3D chromatin structure
Date released
321
November, 2017
194
May, 2020
69
February, 2021
63
December, 2017
54
August, 2017
54
October, 2019
53
November, 2018
50
May, 2019
41
August, 2021
40
May, 2022
35
February, 2023
21
July, 2019
9
June, 2019
7
March, 2020
5
December, 2019
5
January, 2019
4
February, 2020
1
December, 2018
Available data
26
bigWig
25
bam
12
tsv
11
bed bed3+
11
bed narrowPeak
9
bed broadPeak
9
bigBed broadPeak
9
bigBed narrowPeak
3
bed bedMethyl
3
bigBed bedMethyl
2
hdf5
Organism
30
Homo sapiens
Biosample type
18
tissue
12
primary cell
Organ
92
kidney
60
heart
53
musculature of body
48
brain
37
limb
36
connective tissue
33
epithelium
19
vasculature
18
ureter
16
blood vessel
13
adipose tissue
12
liver
10
pancreas
8
eye
5
artery
2
pericardium
Project
30
AMP
Genome assembly (visualization)
26
hg19
24
GRCh38
Lab
30
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
BIOSAMPLE
ASSAY
30 results
search-icon
table-tab-icon
Clear Filters
DNase-seq
total RNA-seq
WGBS
small RNA-seq
ATAC-seq
Hi-C
RRBS
tissue
right lobe of liver
2
1
2
coronary artery
2
1
liver
2
1
thoracic aorta
2
1
aorta
2
+ See 1 more…
primary cell
brain microvascular endothelial cell
1
1
choroid plexus epithelial cell
1
1
hepatocyte
1
1
endothelial cell of coronary artery
1
endothelial cell of hepatic sinusoid
1
+ See 4 more…
See all biosamples
Download