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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
14
total RNA-seq
9
WGBS
4
ATAC-seq
4
small RNA-seq
3
RRBS
1
Hi-C
Assay category
18
Transcription
12
DNA methylation
4
DNA accessibility
1
3D chromatin structure
Date released
315
November, 2017
194
May, 2020
127
August, 2021
69
February, 2021
63
December, 2017
57
April, 2019
54
August, 2017
53
November, 2018
40
May, 2022
40
May, 2024
37
June, 2019
36
February, 2023
35
July, 2019
21
May, 2019
15
October, 2019
10
March, 2020
5
December, 2019
5
January, 2019
4
February, 2020
3
May, 2021
1
December, 2018
Available data
29
bigWig
28
bam
18
tsv
9
bed bedMethyl
9
bigBed bedMethyl
4
bed narrowPeak
1
bed bed3+
1
hdf5
Organism
35
Homo sapiens
Biosample type
28
tissue
7
primary cell
Organ
25
heart
18
brain
18
connective tissue
13
epithelium
12
adipose tissue
12
vasculature
11
blood vessel
11
kidney
10
liver
10
musculature of body
6
pancreas
5
limb
3
artery
2
pericardium
1
eye
Project
35
AMP
Genome assembly (visualization)
28
GRCh38
26
hg19
Lab
35
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
BIOSAMPLE
ASSAY
35 results
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total RNA-seq
WGBS
ATAC-seq
small RNA-seq
RRBS
Hi-C
tissue
heart left ventricle
2
4
2
1
right lobe of liver
2
1
2
heart
2
1
1
liver
2
1
right atrium auricular region
2
1
+ See 3 more…
primary cell
cardiac atrium fibroblast
1
cardiac fibroblast
1
cardiac ventricle fibroblast
1
endothelial cell of coronary artery
1
endothelial cell of hepatic sinusoid
1
+ See 2 more…
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