Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
3
ChIP-seq
2
Hi-C
Assay category
3
DNA binding
2
3D chromatin structure
Target of assay
3
transcription factor
1
RNA binding protein
Date released
3
November, 2017
1
August, 2021
1
March, 2020
Available data
681
bam
622
bigWig
465
fastq
441
bed narrowPeak
358
bigBed narrowPeak
174
tsv
86
tagAlign
63
bed broadPeak
63
bigBed broadPeak
13
bed bed3+
3
bed bedMethyl
3
bigBed bedMethyl
3
tar
2
bedpe bed3+
2
hic
1
bed bed3
1
csv
1
hdf5
1
vcf
Organism
5
Homo sapiens
Biosample type
4
cell line
1
tissue
Organ
7
pancreas
6
epithelium
5
liver
3
blood vessel
3
heart
3
vasculature
2
musculature of body
2
vein
1
adipose tissue
1
connective tissue
Project
5
AMP
Genome assembly (visualization)
5
hg19
Lab
4
AMP-T2D consortium
1
Bing Ren, UCSD
organ_slims!
adrenal gland
BIOSAMPLE
ASSAY
5 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
Hi-C
cell line
HepG2
3
1
tissue
liver
1
Download