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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
169
total RNA-seq
3
small RNA-seq
2
pCHi-C
Assay category
172
Transcription
Date released
144
May, 2020
9
August, 2021
7
July, 2019
5
December, 2019
5
January, 2019
2
March, 2020
1
February, 2020
1
October, 2019
Available data
680
bam
622
bigWig
465
fastq
440
bed narrowPeak
358
bigBed narrowPeak
174
tsv
86
tagAlign
63
bed broadPeak
63
bigBed broadPeak
12
bed bed3+
3
bed bedMethyl
3
bigBed bedMethyl
3
tar
2
bedpe bed3+
2
hic
1
hdf5
1
vcf
Organism
174
Homo sapiens
Biosample type
154
tissue
15
cell line
5
primary cell
Organ
385
pancreas
174
liver
124
epithelium
116
heart
29
connective tissue
26
brain
16
blood vessel
16
kidney
16
vasculature
15
adipose tissue
14
embryo
9
musculature of body
7
limb
6
artery
5
eye
5
nerve
2
intestine
adrenal gland
1
esophagus
1
gonad
1
large intestine
1
lung
1
mammary gland
1
ovary
1
pericardium
1
small intestine
1
spinal cord
1
spleen
1
stomach
1
thymus
1
urinary bladder
Project
174
AMP
Genome assembly (visualization)
162
GRCh38
162
hg19
Lab
165
AMP-T2D consortium
9
Bing Ren, UCSD
organ_slims!
adrenal gland
month_released!
February, 2021
BIOSAMPLE
ASSAY
174 results
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total RNA-seq
small RNA-seq
pCHi-C
tissue
liver
147
1
1
right lobe of liver
3
2
cell line
HepG2
14
1
primary cell
hepatocyte
5
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