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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1
ATAC-seq
1
RRBS
1
WGBS
Assay category
2
DNA methylation
1
DNA accessibility
Date released
1
August, 2017
1
February, 2021
1
November, 2018
Available data
655
bam
598
bigWig
450
fastq
422
bed narrowPeak
343
bigBed narrowPeak
169
tsv
82
tagAlign
62
bed broadPeak
62
bigBed broadPeak
8
bed bed3+
3
tar
2
bed bedMethyl
2
bedpe bed3+
2
bigBed bedMethyl
2
hic
1
bed bed3
1
csv
1
vcf
Organism
3
Homo sapiens
Biosample type
2
cell line
1
tissue
Organ
9
connective tissue
8
heart
epithelium
6
pancreas
4
bone element
4
kidney
4
liver
4
musculature of body
4
skeleton
3
brain
2
adipose tissue
2
spleen
2
vasculature
1
blood vessel
1
eye
1
limb
1
pericardium
Project
3
AMP
Genome assembly (visualization)
2
GRCh38
2
hg19
Lab
3
AMP-T2D consortium
Audit category:
1
inconsistent replicate
organ_slims!
epithelium
BIOSAMPLE
ASSAY
3 results
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ATAC-seq
RRBS
WGBS
cell line
HepG2
1
1
tissue
liver
1
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