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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
122
ChIP-seq
Assay category
122
DNA binding
Target of assay
343
transcription factor
123
histone modification
122
histone
117
control
82
recombinant protein
66
narrow histone mark
59
RNA binding protein
56
broad histone mark
23
chromatin remodeller
2
other context
2
other post-translational modification
Date released
32
August, 2017
27
May, 2020
23
October, 2019
17
December, 2017
15
November, 2017
6
August, 2021
2
May, 2019
Available data
102
bigWig
100
bed narrowPeak
99
bam
58
tagAlign
55
bigBed narrowPeak
44
fastq
14
bed broadPeak
14
bigBed broadPeak
3
bed bed3+
Organism
122
Homo sapiens
Biosample type
89
tissue
18
cell line
12
in vitro differentiated cells
3
primary cell
Organ
187
brain
151
pancreas
102
liver
97
heart
93
epithelium
78
connective tissue
71
vasculature
70
blood vessel
49
limb
33
musculature of body
32
adipose tissue
30
kidney
24
nerve
20
artery
15
vein
12
embryo
6
spleen
4
gonad
4
ovary
3
eye
1
blood
1
bodily fluid
1
lymph node
1
pituitary gland
Project
122
AMP
Genome assembly (visualization)
102
hg19
89
GRCh38
Lab
119
AMP-T2D consortium
3
Bing Ren, UCSD
Audit category:
1
missing controlled_by
Audit category:
12
inconsistent control read length
organ_slims!
intestine
BIOSAMPLE
ASSAY
122 results
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Clear Filters
ChIP-seq
tissue
liver
64
tibial artery
18
right lobe of liver
5
coronary artery
2
cell line
HepG2
18
in vitro differentiated cells
hepatocyte
12
primary cell
hepatocyte
3
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