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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
134
ChIP-seq
Assay category
134
DNA binding
Target of assay
355
transcription factor
135
histone modification
134
histone
132
control
82
recombinant protein
72
narrow histone mark
63
RNA binding protein
62
broad histone mark
23
chromatin remodeller
2
other context
2
other post-translational modification
Date released
64
August, 2017
27
May, 2020
17
December, 2017
15
November, 2017
6
August, 2021
5
October, 2019
Available data
84
bigWig
82
bed narrowPeak
80
bam
65
tagAlign
45
fastq
36
bigBed narrowPeak
15
bed broadPeak
14
bigBed broadPeak
3
bed bed3+
Organism
134
Homo sapiens
Biosample type
101
tissue
18
cell line
12
in vitro differentiated cells
3
primary cell
Organ
187
brain
151
pancreas
102
liver
93
epithelium
78
connective tissue
71
vasculature
70
blood vessel
62
heart
49
limb
33
musculature of body
32
adipose tissue
30
kidney
24
nerve
20
artery
15
vein
12
embryo
6
spleen
4
gonad
4
ovary
3
eye
1
blood
1
bodily fluid
1
lymph node
1
pituitary gland
Project
134
AMP
Genome assembly (visualization)
84
hg19
70
GRCh38
Lab
131
AMP-T2D consortium
3
Bing Ren, UCSD
Audit category:
1
missing controlled_by
Audit category:
12
inconsistent control read length
BIOSAMPLE
ASSAY
134 results
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ChIP-seq
tissue
liver
64
subcutaneous abdominal adipose tissue
31
right lobe of liver
5
adipose tissue
1
cell line
HepG2
18
in vitro differentiated cells
hepatocyte
12
primary cell
hepatocyte
3
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