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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
45
ChIP-seq
4
DNase-seq
2
ATAC-seq
1
FAIRE-seq
1
Hi-C
1
total RNA-seq
Assay category
45
DNA binding
7
DNA accessibility
1
3D chromatin structure
1
Transcription
Target of assay
38
histone
38
histone modification
26
broad histone mark
12
narrow histone mark
7
control
Date released
318
November, 2017
194
May, 2020
69
February, 2021
63
December, 2017
54
August, 2017
54
October, 2019
53
November, 2018
50
May, 2019
41
August, 2021
40
May, 2022
35
February, 2023
20
July, 2019
7
June, 2019
7
March, 2020
5
December, 2019
5
January, 2019
4
February, 2020
1
December, 2018
Available data
53
bam
42
bigWig
40
bed narrowPeak
33
bigBed narrowPeak
6
bed broadPeak
6
bigBed broadPeak
4
bed bed3+
1
hic
1
tar
1
tsv
Organism
54
Homo sapiens
Biosample type
32
tissue
22
primary cell
Organ
86
brain
69
limb
47
blood vessel
47
vasculature
42
nerve
35
epithelium
30
kidney
26
artery
21
eye
21
vein
18
pancreas
8
heart
7
liver
4
connective tissue
4
gonad
4
ovary
2
pituitary gland
1
adipose tissue
1
lymph node
1
skin of body
Project
54
AMP
Genome assembly (visualization)
44
hg19
40
GRCh38
Lab
54
AMP-T2D consortium
Audit category:
1
audit script error
1
inconsistent ontology term
BIOSAMPLE
ASSAY
54 results
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Clear Filters
ChIP-seq
DNase-seq
ATAC-seq
FAIRE-seq
Hi-C
total RNA-seq
tissue
tibial artery
23
2
1
liver
5
1
primary cell
endothelial cell of umbilical vein
17
2
1
1
Liver fetal (hepatocyte)
1
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