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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
8
Hi-C
Assay category
8
3D chromatin structure
Date released
3
October, 2022
2
March, 2020
1
August, 2021
1
November, 2019
1
October, 2019
Available data
972
bam
899
bigWig
707
fastq
573
bed narrowPeak
419
bigBed narrowPeak
325
tsv
89
tagAlign
84
bed broadPeak
84
bigBed broadPeak
80
zippedFastqFolder
29
bed bed3+
8
bed bedMethyl
8
bigBed bedMethyl
8
hic
7
bedpe bed3+
4
tar
3
cool
2
hdf5
1
bed bed3
1
csv
1
vcf
Organism
8
Homo sapiens
Biosample type
5
primary cell
2
cell line
1
tissue
Organ
7
pancreas
6
epithelium
3
blood vessel
3
heart
3
vasculature
2
liver
2
musculature of body
2
vein
1
kidney
Project
5
AMP
3
HPAP
Genome assembly (visualization)
8
hg19
Lab
4
AMP-T2D consortium
3
Klaus Kaestner, Upenn
1
Bing Ren, UCSD
Audit category:
4
audit script error
1
inconsistent ontology term
BIOSAMPLE
ASSAY
8 results
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Clear Filters
Hi-C
primary cell
endothelial cell of umbilical vein
2
pancreatic acinar cell
1
pancreatic alpha cell
1
pancreatic beta cell
1
cell line
EndoC_BH1
1
HepG2
1
tissue
liver
1
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