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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
557
ChIP-seq
208
total RNA-seq
51
ATAC-seq
10
DNase-seq
7
pCHi-C
5
WGBS
4
Hi-C
3
RRBS
3
small RNA-seq
2
STARR-seq
1
single cell RNA-seq
1
whole genome sequencing assay
Assay category
51
DNA accessibility
Date released
27
February, 2023
20
May, 2022
2
October, 2019
1
August, 2017
1
February, 2021
Available data
50
bed narrowPeak
21
bigWig
3
bam
1
bed bed3
1
bigBed narrowPeak
1
fastq
Organism
51
Homo sapiens
Biosample type
49
tissue
1
cell line
1
primary cell
Organ
152
pancreas
103
epithelium
75
kidney
47
heart
46
blood vessel
46
vasculature
45
artery
28
eye
25
connective tissue
23
liver
12
bone element
12
skeleton
8
limb
6
adipose tissue
4
brain
1
blood
1
bodily fluid
1
musculature of body
1
nerve
1
pituitary gland
1
skin of body
1
spleen
Project
51
AMP
Genome assembly (visualization)
50
hg19
3
GRCh38
Lab
31
AMP-T2D consortium
20
Karen Mohlke, UNC
Audit category:
1
inconsistent ontology term
1
inconsistent replicate
BIOSAMPLE
ASSAY
51 results
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ATAC-seq
tissue
liver
20
retina
15
pigmented layer of retina
12
islet of Langerhans
1
right lobe of liver
1
cell line
HepG2
1
primary cell
Liver fetal (hepatocyte)
1
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