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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
174
total RNA-seq
3
small RNA-seq
2
pCHi-C
Assay category
177
Transcription
Date released
144
May, 2020
9
August, 2021
7
July, 2019
5
December, 2019
5
January, 2019
4
February, 2023
2
February, 2020
2
March, 2020
1
October, 2019
Available data
688
bam
628
bigWig
474
bed narrowPeak
465
fastq
364
bigBed narrowPeak
179
tsv
86
tagAlign
67
bed broadPeak
67
bigBed broadPeak
17
bed bed3+
4
bed bedMethyl
4
bigBed bedMethyl
3
tar
2
bedpe bed3+
2
hic
1
bed bed3
1
csv
1
hdf5
1
vcf
Organism
179
Homo sapiens
Biosample type
159
tissue
15
cell line
5
primary cell
Organ
478
connective tissue
417
pancreas
401
adipose tissue
174
liver
168
heart
156
epithelium
68
blood vessel
68
vasculature
58
artery
58
bone element
26
brain
24
kidney
14
embryo
9
musculature of body
7
limb
5
eye
5
nerve
2
intestine
1
adrenal gland
1
esophagus
1
gonad
1
large intestine
1
lung
1
mammary gland
1
ovary
1
pericardium
1
small intestine
1
spinal cord
1
spleen
1
stomach
1
thymus
1
urinary bladder
Project
179
AMP
Genome assembly (visualization)
162
GRCh38
162
hg19
Lab
170
AMP-T2D consortium
9
Bing Ren, UCSD
BIOSAMPLE
ASSAY
179 results
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total RNA-seq
small RNA-seq
pCHi-C
tissue
liver
147
1
1
right lobe of liver
3
2
retina
3
pigmented layer of retina
2
cell line
HepG2
14
1
primary cell
hepatocyte
5
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