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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
41
ChIP-seq
Assay category
41
DNA binding
Target of assay
327
transcription factor
104
control
100
histone modification
99
histone
82
recombinant protein
58
narrow histone mark
57
RNA binding protein
41
broad histone mark
23
chromatin remodeller
2
other context
2
other post-translational modification
Date released
19
August, 2017
10
December, 2017
8
November, 2017
3
October, 2019
1
August, 2021
Available data
29
bam
29
bigWig
28
bed narrowPeak
25
fastq
21
bigBed narrowPeak
18
tagAlign
8
bed broadPeak
8
bigBed broadPeak
1
bed bed3+
Organism
41
Homo sapiens
Biosample type
25
tissue
8
cell line
7
in vitro differentiated cells
1
primary cell
Organ
78
pancreas
70
brain
45
blood vessel
45
vasculature
44
connective tissue
44
epithelium
41
liver
37
heart
34
limb
20
adipose tissue
20
musculature of body
16
nerve
15
kidney
14
artery
9
vein
4
embryo
4
spleen
0
intestine
Project
41
AMP
Genome assembly (visualization)
29
hg19
28
GRCh38
Lab
41
AMP-T2D consortium
1
Bing Ren, UCSD
Audit category:
6
inconsistent control read length
BIOSAMPLE
ASSAY
41 results
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ChIP-seq
tissue
liver
22
right lobe of liver
3
cell line
HepG2
8
in vitro differentiated cells
hepatocyte
7
primary cell
hepatocyte
1
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