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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
62
ChIP-seq
Assay category
62
DNA binding
Target of assay
355
transcription factor
135
histone modification
134
histone
132
control
82
recombinant protein
72
narrow histone mark
63
RNA binding protein
62
broad histone mark
23
chromatin remodeller
2
other context
2
other post-translational modification
Date released
39
August, 2017
10
December, 2017
8
November, 2017
3
October, 2019
2
August, 2021
Available data
30
bigWig
29
bam
29
bed narrowPeak
25
fastq
22
tagAlign
21
bigBed narrowPeak
8
bed broadPeak
8
bigBed broadPeak
1
bed bed3+
Organism
62
Homo sapiens
Biosample type
45
tissue
9
cell line
7
in vitro differentiated cells
1
primary cell
Organ
78
pancreas
70
brain
57
heart
45
blood vessel
45
vasculature
44
connective tissue
44
epithelium
42
liver
34
limb
20
adipose tissue
20
musculature of body
16
nerve
15
kidney
14
artery
9
vein
4
embryo
4
spleen
0
intestine
Project
62
AMP
Genome assembly (visualization)
30
hg19
28
GRCh38
Lab
61
AMP-T2D consortium
1
Bing Ren, UCSD
Audit category:
6
inconsistent control read length
BIOSAMPLE
ASSAY
62 results
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ChIP-seq
tissue
liver
22
subcutaneous abdominal adipose tissue
20
right lobe of liver
3
cell line
HepG2
9
in vitro differentiated cells
hepatocyte
7
primary cell
hepatocyte
1
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