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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
88
ChIP-seq
Assay category
88
DNA binding
Target of assay
97
transcription factor
89
histone modification
88
histone
54
narrow histone mark
52
control
34
broad histone mark
24
RNA binding protein
16
recombinant protein
8
chromatin remodeller
Date released
32
August, 2017
27
May, 2020
17
December, 2017
November, 2017
6
August, 2021
6
October, 2019
Available data
67
bed narrowPeak
67
bigWig
64
bam
47
tagAlign
29
fastq
22
bigBed narrowPeak
3
bed bed3+
Organism
88
Homo sapiens
Biosample type
70
tissue
12
in vitro differentiated cells
3
cell line
3
primary cell
Organ
151
pancreas
114
brain
97
heart
91
epithelium
87
liver
78
connective tissue
69
blood vessel
69
vasculature
49
limb
33
musculature of body
32
adipose tissue
30
kidney
24
nerve
20
artery
15
vein
12
embryo
6
spleen
4
gonad
4
ovary
3
eye
1
blood
1
bodily fluid
1
lymph node
1
pituitary gland
Project
88
AMP
Genome assembly (visualization)
67
hg19
56
GRCh38
Lab
85
AMP-T2D consortium
3
Bing Ren, UCSD
Audit category:
1
inconsistent control read length
month_released!
November, 2017
BIOSAMPLE
ASSAY
88 results
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ChIP-seq
tissue
liver
64
right lobe of liver
5
islet of Langerhans
1
in vitro differentiated cells
hepatocyte
12
cell line
HepG2
3
primary cell
hepatocyte
3
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