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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
552
ChIP-seq
189
total RNA-seq
24
ATAC-seq
6
DNase-seq
5
WGBS
4
Hi-C
3
pCHi-C
3
small RNA-seq
2
RRBS
2
STARR-seq
1
single cell RNA-seq
1
whole genome sequencing assay
Assay category
4
3D chromatin structure
2
DNA methylation
Date released
2
July, 2019
1
August, 2017
1
August, 2021
1
December, 2018
1
March, 2020
Available data
2
bed bedMethyl
2
bedpe bed3+
2
bigBed bedMethyl
2
fastq
2
hic
1
bed bed3+
1
bigWig
1
hdf5
Organism
6
Homo sapiens
Biosample type
2
cell line
2
primary cell
2
tissue
Organ
14
epithelium
11
musculature of body
11
pancreas
6
liver
6
vasculature
5
blood vessel
5
brain
5
heart
5
kidney
4
limb
2
connective tissue
2
vein
1
eye
1
pericardium
0
skin of body
Project
6
AMP
Genome assembly (visualization)
5
hg19
Lab
5
AMP-T2D consortium
1
Bing Ren, UCSD
BIOSAMPLE
ASSAY
6 results
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Hi-C
RRBS
cell line
HepG2
2
primary cell
endothelial cell of hepatic sinusoid
1
hepatocyte
1
tissue
liver
1
1
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