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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
51
ChIP-seq
Assay category
51
DNA binding
Target of assay
286
transcription factor
81
recombinant protein
70
histone modification
69
histone
51
RNA binding protein
41
narrow histone mark
28
broad histone mark
21
chromatin remodeller
2
other context
2
other post-translational modification
1
control
Date released
28
November, 2017
19
November, 2018
4
December, 2017
Available data
51
bam
51
bed narrowPeak
51
bigBed narrowPeak
51
bigWig
51
fastq
3
bed broadPeak
3
bigBed broadPeak
Organism
51
Homo sapiens
Biosample type
47
cell line
2
in vitro differentiated cells
2
tissue
Organ
51
liver
10
blood
10
bodily fluid
10
connective tissue
9
pancreas
8
epithelium
6
heart
5
adipose tissue
5
vasculature
4
blood vessel
3
brain
2
kidney
1
artery
1
eye
0
skin of body
Project
51
AMP
Genome assembly (visualization)
55
hg19
51
GRCh38
Lab
51
AMP-T2D consortium
Audit category:
1
missing controlled_by
Audit category:
5
inconsistent control read length
2
inconsistent control run_type
BIOSAMPLE
ASSAY
51 results
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ChIP-seq
cell line
HepG2
47
in vitro differentiated cells
hepatocyte
2
tissue
liver
1
right lobe of liver
1
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