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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
110
ChIP-seq
Assay category
110
DNA binding
Target of assay
338
transcription factor
108
control
103
histone modification
102
histone
82
recombinant protein
60
narrow histone mark
58
RNA binding protein
42
broad histone mark
23
chromatin remodeller
2
other context
2
other post-translational modification
Date released
58
November, 2017
23
May, 2020
13
December, 2017
11
August, 2017
5
August, 2021
Available data
103
bam
79
fastq
28
tagAlign
15
bigWig
2
bed narrowPeak
2
bigBed narrowPeak
1
bed bed3+
1
bed broadPeak
1
bigBed broadPeak
Organism
110
Homo sapiens
Biosample type
62
cell line
46
tissue
1
in vitro differentiated cells
1
primary cell
Organ
110
liver
53
pancreas
35
connective tissue
31
brain
30
epithelium
24
adipose tissue
22
vasculature
21
blood vessel
20
heart
17
limb
12
kidney
11
nerve
11
spleen
9
artery
7
embryo
6
blood
6
bodily fluid
6
musculature of body
2
vein
1
eye
Project
110
AMP
Genome assembly (visualization)
16
hg19
3
GRCh38
Lab
106
AMP-T2D consortium
4
Bing Ren, UCSD
BIOSAMPLE
ASSAY
110 results
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ChIP-seq
cell line
HepG2
62
tissue
liver
43
right lobe of liver
3
in vitro differentiated cells
hepatocyte
1
primary cell
hepatocyte
1
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