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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
105
ChIP-seq
Assay category
105
DNA binding
Target of assay
338
transcription factor
108
control
103
histone modification
102
histone
82
recombinant protein
60
narrow histone mark
58
RNA binding protein
42
broad histone mark
23
chromatin remodeller
2
other context
2
other post-translational modification
Date released
33
August, 2017
27
May, 2020
17
December, 2017
17
November, 2017
6
August, 2021
5
October, 2019
Available data
85
bigWig
83
bed narrowPeak
82
bam
58
tagAlign
47
fastq
37
bigBed narrowPeak
15
bed broadPeak
15
bigBed broadPeak
3
bed bed3+
Organism
105
Homo sapiens
Biosample type
70
tissue
20
cell line
12
in vitro differentiated cells
3
primary cell
Organ
187
brain
151
pancreas
105
liver
93
epithelium
78
connective tissue
71
vasculature
70
blood vessel
62
heart
49
limb
33
musculature of body
32
adipose tissue
30
kidney
24
nerve
20
artery
15
vein
12
embryo
9
spleen
4
gonad
4
ovary
3
eye
1
blood
1
bodily fluid
1
lymph node
1
pituitary gland
Project
105
AMP
Genome assembly (visualization)
85
hg19
72
GRCh38
Lab
102
AMP-T2D consortium
3
Bing Ren, UCSD
Audit category:
1
missing controlled_by
Audit category:
12
inconsistent control read length
BIOSAMPLE
ASSAY
105 results
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Clear Filters
ChIP-seq
tissue
liver
65
right lobe of liver
5
cell line
HepG2
20
in vitro differentiated cells
hepatocyte
12
primary cell
hepatocyte
3
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