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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
190
ChIP-seq
Assay category
190
DNA binding
Target of assay
338
transcription factor
108
control
103
histone modification
102
histone
82
recombinant protein
60
narrow histone mark
58
RNA binding protein
42
broad histone mark
23
chromatin remodeller
2
other context
2
other post-translational modification
Date released
122
November, 2017
23
May, 2020
16
November, 2018
13
December, 2017
11
August, 2017
5
August, 2021
Available data
183
bam
159
fastq
94
bigWig
81
bed narrowPeak
81
bigBed narrowPeak
28
tagAlign
1
bed bed3+
Organism
190
Homo sapiens
Biosample type
142
cell line
46
tissue
1
in vitro differentiated cells
1
primary cell
Organ
190
liver
53
pancreas
35
connective tissue
31
brain
30
epithelium
24
adipose tissue
22
vasculature
21
blood vessel
20
heart
19
kidney
17
limb
11
nerve
9
artery
8
spleen
7
embryo
6
blood
6
bodily fluid
6
musculature of body
2
vein
1
eye
Project
190
AMP
Genome assembly (visualization)
92
hg19
82
GRCh38
Lab
186
AMP-T2D consortium
4
Bing Ren, UCSD
Audit category:
1
missing controlled_by
Audit category:
1
inconsistent control read length
BIOSAMPLE
ASSAY
190 results
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ChIP-seq
cell line
HepG2
142
tissue
liver
43
right lobe of liver
3
in vitro differentiated cells
hepatocyte
1
primary cell
hepatocyte
1
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