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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
329
ChIP-seq
Assay category
329
DNA binding
Target of assay
329
transcription factor
81
histone modification
81
recombinant protein
80
histone
56
RNA binding protein
51
narrow histone mark
29
broad histone mark
23
chromatin remodeller
2
other context
2
other post-translational modification
Date released
233
November, 2017
48
November, 2018
33
December, 2017
11
August, 2021
4
August, 2017
Available data
333
bigWig
329
bed narrowPeak
327
fastq
326
bam
314
bigBed narrowPeak
44
bed broadPeak
44
bigBed broadPeak
3
tar
2
bed bed3+
Organism
329
Homo sapiens
Biosample type
288
cell line
39
tissue
2
in vitro differentiated cells
Organ
329
liver
51
blood
51
bodily fluid
23
connective tissue
13
pancreas
12
heart
9
epithelium
9
kidney
9
vasculature
8
blood vessel
6
spleen
5
adipose tissue
5
artery
3
brain
3
embryo
1
eye
Project
329
AMP
Genome assembly (visualization)
325
hg19
286
GRCh38
Lab
318
AMP-T2D consortium
11
Bing Ren, UCSD
Audit category:
27
inconsistent control
Audit category:
11
missing controlled_by
Audit category:
15
inconsistent control read length
8
inconsistent control run_type
BIOSAMPLE
ASSAY
329 results
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ChIP-seq
cell line
HepG2
288
tissue
liver
37
right lobe of liver
2
in vitro differentiated cells
hepatocyte
2
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