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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
11
single cell RNA-seq
10
snATAC-seq
7
ChIP-seq
2
total RNA-seq
1
pCHi-C
Assay category
13
Transcription
10
DNA accessibility
7
DNA binding
Target of assay
7
control
Date released
19
April, 2020
5
October, 2019
2
August, 2021
2
February, 2020
2
May, 2019
1
March, 2020
Available data
bed narrowPeak
34
bam
27
bigWig
25
bigBed narrowPeak
5
tsv
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
Organism
30
Homo sapiens
Biosample type
54
cell line
31
tissue
2
primary cell
Organ
534
connective tissue
475
adipose tissue
382
pancreas
248
liver
150
bone element
146
kidney
140
heart
73
brain
33
blood vessel
33
vasculature
31
musculature of body
30
limb
26
eye
20
lung
16
nerve
11
artery
11
spleen
8
skeleton
5
gonad
5
ovary
3
epithelium
2
intestine
2
thymus
1
adrenal gland
1
esophagus
1
large intestine
1
lymph node
1
pericardium
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
19
LungMap
12
AMP
Lab
19
Xin Sun, UCSD
12
AMP-T2D consortium
files.file_type!
bed narrowPeak
BIOSAMPLE
ASSAY
31 results
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single cell RNA-seq
snATAC-seq
ChIP-seq
total RNA-seq
pCHi-C
tissue
lung
9
10
1
tibial artery
5
1
coronary artery
2
1
pulmonary artery
2
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