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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
36
ChIP-seq
10
snATAC-seq
9
single cell RNA-seq
5
total RNA-seq
2
DNase-seq
1
ATAC-seq
pCHi-C
Assay category
36
DNA binding
14
Transcription
13
DNA accessibility
Target of assay
25
histone
25
histone modification
16
broad histone mark
11
control
9
narrow histone mark
Date released
43
October, 2019
19
April, 2020
1
February, 2020
Available data
42
bam
31
bigWig
27
bed narrowPeak
26
bigBed narrowPeak
5
tsv
2
bed bed3+
2
bed broadPeak
2
bigBed broadPeak
Organism
62
Homo sapiens
Biosample type
63
tissue
Organ
945
pancreas
788
liver
679
connective tissue
524
epithelium
489
adipose tissue
390
heart
352
kidney
284
brain
235
vasculature
229
blood vessel
158
bone element
141
artery
122
limb
95
musculature of body
69
blood
69
bodily fluid
57
eye
43
nerve
37
embryo
24
spleen
22
vein
19
lung
18
ureter
16
skeleton
4
gonad
4
ovary
2
pericardium
2
pituitary gland
1
lymph node
1
skin of body
1
spinal cord
Project
44
AMP
19
LungMap
Genome assembly (visualization)
31
GRCh38
31
hg19
Lab
44
AMP-T2D consortium
19
Xin Sun, UCSD
assay_title!
pCHi-C
BIOSAMPLE
ASSAY
63 results
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ChIP-seq
snATAC-seq
single cell RNA-seq
total RNA-seq
DNase-seq
ATAC-seq
tissue
tibial nerve
35
5
2
1
lung
10
9
islet of Langerhans
1
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