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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
27
ChIP-seq
13
ATAC-seq
9
total RNA-seq
2
DNase-seq
Assay category
27
DNA binding
15
DNA accessibility
9
Transcription
Target of assay
25
histone
25
histone modification
16
broad histone mark
11
control
narrow histone mark
Date released
34
October, 2019
8
February, 2021
8
February, 2023
1
February, 2020
Available data
42
bam
27
bed narrowPeak
23
bigWig
18
bigBed narrowPeak
5
tsv
4
bed bed3
4
txt
2
bed bed3+
2
bed broadPeak
2
bigBed broadPeak
Organism
51
Homo sapiens
Biosample type
51
tissue
Organ
873
pancreas
731
liver
651
connective tissue
479
adipose tissue
475
epithelium
353
heart
339
kidney
210
vasculature
205
blood vessel
169
brain
159
bone element
135
artery
107
limb
83
musculature of body
68
blood
68
bodily fluid
58
eye
35
nerve
29
embryo
23
spleen
20
lung
18
ureter
16
skeleton
16
vein
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
gonad
1
large intestine
1
mammary gland
1
ovary
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
0
lymph node
Project
51
AMP
Genome assembly (visualization)
35
hg19
31
GRCh38
Lab
51
AMP-T2D consortium
target.investigated_as!
narrow histone mark
BIOSAMPLE
ASSAY
51 results
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ChIP-seq
ATAC-seq
total RNA-seq
DNase-seq
tissue
tibial nerve
27
1
5
2
acetabular part of hip bone
1
1
ilium
1
1
ischium
1
1
pubis
1
1
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