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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
51
ChIP-seq
Assay category
51
DNA binding
Target of assay
51
histone
51
histone modification
28
narrow histone mark
23
broad histone mark
17
control
4
RNA binding protein
4
transcription factor
1
chromatin remodeller
Date released
21
September, 2018
14
August, 2017
14
December, 2017
2
November, 2017
Available data
93
bam
90
bigWig
88
bed narrowPeak
51
fastq
29
bigBed narrowPeak
4
bed broadPeak
4
bigBed broadPeak
4
tagAlign
3
bed bed3+
Organism
51
Homo sapiens
Biosample type
37
primary cell
14
in vitro differentiated cells
Organ
100
pancreas
51
epithelium
45
liver
26
connective tissue
12
embryo
10
brain
6
spleen
2
vasculature
1
adipose tissue
1
blood
1
blood vessel
1
bodily fluid
0
lymph node
Project
51
AMP
Genome assembly (visualization)
51
GRCh38
51
hg19
Lab
51
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
Audit category:
21
missing controlled_by
Audit category:
5
inconsistent control read length
BIOSAMPLE
ASSAY
51 results
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ChIP-seq
primary cell
pancreatic ductal cell
13
pancreatic acinar cell
8
pancreatic alpha cell
7
pancreatic beta cell
7
brain microvascular endothelial cell
1
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in vitro differentiated cells
hepatocyte
12
Hepatic endoderm
2
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