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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
21
ChIP-seq
6
total RNA-seq
Assay category
21
DNA binding
6
Transcription
DNA accessibility
Target of assay
8
histone
8
histone modification
7
recombinant protein
7
transcription factor
6
control
5
narrow histone mark
3
broad histone mark
Date released
60
August, 2021
47
September, 2023
27
October, 2019
23
April, 2019
10
July, 2019
8
February, 2021
5
May, 2019
3
December, 2019
3
June, 2019
3
March, 2020
3
May, 2023
Available data
27
bam
21
bigWig
15
bed narrowPeak
6
tsv
Organism
27
Homo sapiens
Biosample type
14
cell line
9
primary cell
4
tissue
Organ
85
brain
63
limb
41
blood vessel
41
vasculature
39
nerve
28
epithelium
27
kidney
23
artery
20
eye
18
vein
14
pancreas
8
heart
6
liver
4
gonad
4
ovary
1
connective tissue
1
lymph node
1
pituitary gland
0
mammary gland
Project
27
AMP
Genome assembly (visualization)
21
GRCh38
21
hg19
Lab
27
AMP-T2D consortium
Audit category:
13
inconsistent ontology term
assay_slims!
DNA accessibility
BIOSAMPLE
ASSAY
27 results
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ChIP-seq
total RNA-seq
cell line
RCC 7860 HIF1a re-expression
4
1
RCC 7860 HIF2a over-expression
3
1
RCC 7860 vector
3
1
glomerular visceral epithelial cell
1
primary cell
epithelial cell of proximal tubule
7
kidney glomerular epithelial cell
1
kidney tubule cell
1
tissue
kidney
4
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