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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
35
ChIP-seq
5
total RNA-seq
2
DNase-seq
ATAC-seq
1
pCHi-C
Assay category
35
DNA binding
5
Transcription
2
DNA accessibility
Target of assay
24
histone
24
histone modification
16
broad histone mark
11
control
8
narrow histone mark
Date released
41
October, 2019
1
February, 2020
1
March, 2020
Available data
41
bam
30
bigWig
26
bed narrowPeak
26
bigBed narrowPeak
6
tsv
2
bed bed3+
2
bed broadPeak
2
bigBed broadPeak
Organism
43
Homo sapiens
Biosample type
43
tissue
1
cell line
Organ
541
connective tissue
482
adipose tissue
443
pancreas
340
liver
274
heart
261
brain
224
kidney
146
bone element
114
limb
95
blood vessel
95
vasculature
81
musculature of body
42
nerve
36
artery
28
eye
24
spleen
20
lung
18
ureter
5
gonad
5
ovary
4
skeleton
3
epithelium
2
intestine
2
thymus
1
adrenal gland
1
esophagus
1
large intestine
1
lymph node
1
pericardium
1
pituitary gland
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
0
mammary gland
Project
43
AMP
Genome assembly (visualization)
30
GRCh38
30
hg19
Lab
43
AMP-T2D consortium
assay_title!
ATAC-seq
BIOSAMPLE
ASSAY
43 results
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ChIP-seq
total RNA-seq
DNase-seq
pCHi-C
tissue
tibial nerve
35
5
2
esophagus
1
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