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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
6
Hi-C
6
total RNA-seq
5
RRBS
2
small RNA-seq
1
WGBS
1
pCHi-C
1
single cell RNA-seq
Assay category
DNA binding
DNA accessibility
9
Transcription
6
3D chromatin structure
6
DNA methylation
Date released
10
July, 2019
5
March, 2020
4
August, 2017
2
February, 2020
1
May, 2022
Available data
9
tsv
7
bam
7
bigWig
4
bed bedMethyl
4
bigBed bedMethyl
2
bedpe bed3+
2
fastq
2
hic
Organism
22
Homo sapiens
Biosample type
19
tissue
3
primary cell
Organ
555
pancreas
497
connective tissue
410
adipose tissue
272
epithelium
210
liver
182
heart
147
bone element
139
kidney
76
vasculature
75
blood vessel
58
artery
31
brain
24
eye
22
musculature of body
15
embryo
12
limb
10
lung
5
nerve
4
skeleton
3
spleen
2
intestine
2
pericardium
2
thymus
2
vein
1
adrenal gland
1
bone marrow
1
esophagus
1
gonad
1
large intestine
1
mammary gland
1
ovary
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
22
AMP
Genome assembly (visualization)
11
hg19
7
GRCh38
Lab
22
AMP-T2D consortium
assay_slims!
DNA accessibility
DNA binding
BIOSAMPLE
ASSAY
22 results
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Clear Filters
Hi-C
total RNA-seq
RRBS
small RNA-seq
WGBS
pCHi-C
single cell RNA-seq
tissue
skeletal muscle tissue
1
4
1
1
gastrocnemius medialis
4
1
psoas muscle
2
2
1
left ventricle myocardium
1
muscle of leg
1
primary cell
skeletal muscle satellite cell
1
1
skeletal muscle cell
1
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