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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
14
ChIP-seq
2
Hi-C
Assay category
DNA accessibility
14
DNA binding
2
3D chromatin structure
Target of assay
14
histone
14
histone modification
8
broad histone mark
6
narrow histone mark
Date released
8
June, 2019
6
May, 2019
2
March, 2020
Available data
34
bigWig
27
bed narrowPeak
24
bam
15
tagAlign
14
bigBed narrowPeak
13
bed broadPeak
9
tsv
4
bed bedMethyl
4
bigBed bedMethyl
2
bedpe bed3+
2
fastq
2
hic
Organism
16
Homo sapiens
Biosample type
8
primary cell
8
tissue
Organ
354
liver
94
brain
74
vasculature
72
blood vessel
67
heart
66
pancreas
54
blood
54
bodily fluid
48
limb
42
epithelium
25
kidney
24
nerve
21
artery
16
musculature of body
15
connective tissue
12
spleen
12
vein
6
adipose tissue
2
eye
Project
16
AMP
Genome assembly (visualization)
16
hg19
13
GRCh38
Lab
16
AMP-T2D consortium
Audit category:
7
inconsistent ontology term
assay_slims!
DNA accessibility
BIOSAMPLE
ASSAY
16 results
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ChIP-seq
Hi-C
primary cell
skeletal muscle satellite cell
7
skeletal muscle cell
1
tissue
muscle of leg
6
psoas muscle
2
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