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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
68
ChIP-seq
Assay category
68
DNA binding
DNA accessibility
Target of assay
51
transcription factor
15
histone
15
histone modification
10
RNA binding protein
10
chromatin remodeller
8
broad histone mark
7
narrow histone mark
Date released
27
December, 2018
15
January, 2019
12
November, 2018
8
June, 2019
6
May, 2019
Available data
88
bigWig
84
bam
81
bed narrowPeak
68
bigBed narrowPeak
62
fastq
15
tagAlign
13
bed broadPeak
9
tsv
4
bed bedMethyl
4
bigBed bedMethyl
2
bedpe bed3+
2
hic
Organism
68
Homo sapiens
Biosample type
54
cell line
8
primary cell
6
tissue
Organ
352
liver
94
brain
71
vasculature
69
blood vessel
64
heart
59
pancreas
54
blood
54
bodily fluid
48
limb
36
epithelium
24
kidney
24
nerve
21
artery
15
connective tissue
14
musculature of body
12
spleen
10
vein
6
adipose tissue
2
eye
Project
68
AMP
Genome assembly (visualization)
68
hg19
67
GRCh38
Lab
68
AMP-T2D consortium
Audit category:
7
inconsistent ontology term
1
inconsistent control
assay_slims!
DNA accessibility
BIOSAMPLE
ASSAY
68 results
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ChIP-seq
cell line
GM12878
54
primary cell
skeletal muscle satellite cell
7
skeletal muscle cell
1
tissue
muscle of leg
6
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