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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
33
DNase-seq
13
ChIP-seq
4
total RNA-seq
2
small RNA-seq
Assay category
33
DNA accessibility
13
DNA binding
6
Transcription
DNA methylation
Target of assay
13
histone
13
histone modification
8
broad histone mark
5
narrow histone mark
Date released
41
June, 2019
5
May, 2019
4
July, 2019
2
March, 2020
Available data
52
bam
52
bigWig
46
bed narrowPeak
46
bigBed narrowPeak
33
bed bed3+
33
bed broadPeak
33
bigBed broadPeak
6
tsv
Organism
52
Homo sapiens
Biosample type
41
tissue
11
primary cell
Organ
631
pancreas
564
connective tissue
530
liver
422
adipose tissue
294
epithelium
220
heart
217
brain
205
kidney
190
vasculature
186
blood vessel
128
artery
95
limb
66
bone element
54
blood
54
bodily fluid
52
musculature of body
31
nerve
29
embryo
18
ureter
14
spleen
12
vein
8
skeleton
6
eye
1
pericardium
1
pituitary gland
Project
52
AMP
Genome assembly (visualization)
70
hg19
52
GRCh38
Lab
52
AMP-T2D consortium
Audit category:
8
inconsistent ontology term
assay_slims!
DNA methylation
BIOSAMPLE
ASSAY
52 results
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DNase-seq
ChIP-seq
total RNA-seq
small RNA-seq
tissue
muscle of leg
13
5
muscle of arm
17
psoas muscle
2
skeletal muscle tissue
1
1
forelimb muscle
1
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primary cell
skeletal muscle satellite cell
7
1
1
skeletal muscle cell
1
1
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