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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
DNase-seq
13
ChIP-seq
4
total RNA-seq
2
small RNA-seq
1
WGBS
Assay category
13
DNA binding
6
Transcription
1
DNA methylation
Target of assay
13
histone
13
histone modification
8
broad histone mark
5
narrow histone mark
Date released
8
June, 2019
5
July, 2019
5
May, 2019
2
March, 2020
Available data
20
bam
20
bigWig
13
bed narrowPeak
13
bigBed narrowPeak
6
tsv
1
bed bedMethyl
1
bigBed bedMethyl
Organism
20
Homo sapiens
Biosample type
10
primary cell
10
tissue
Organ
627
pancreas
557
connective tissue
526
liver
422
adipose tissue
277
epithelium
196
heart
185
brain
180
vasculature
178
blood vessel
126
kidney
124
artery
66
bone element
60
limb
54
blood
54
bodily fluid
29
embryo
29
nerve
20
musculature of body
15
spleen
10
vein
8
skeleton
2
eye
1
pericardium
1
pituitary gland
Project
20
AMP
Genome assembly (visualization)
40
hg19
20
GRCh38
Lab
20
AMP-T2D consortium
Audit category:
7
inconsistent ontology term
assay_title!
DNase-seq
BIOSAMPLE
ASSAY
20 results
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ChIP-seq
total RNA-seq
small RNA-seq
WGBS
primary cell
skeletal muscle satellite cell
7
1
1
skeletal muscle cell
1
tissue
muscle of leg
5
1
psoas muscle
2
skeletal muscle tissue
1
1
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