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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
12
ChIP-seq
6
Hi-C
5
RRBS
2
total RNA-seq
1
pCHi-C
1
single cell RNA-seq
1
snATAC-seq
0
ATAC-seq
Assay category
12
DNA binding
Target of assay
6
control
6
histone
6
histone modification
4
broad histone mark
2
narrow histone mark
Date released
9
August, 2017
2
June, 2019
1
May, 2019
Available data
bigWig
27
bed narrowPeak
17
bam
15
tagAlign
14
bigBed narrowPeak
13
bed broadPeak
Organism
12
Homo sapiens
Biosample type
10
tissue
2
primary cell
Organ
168
pancreas
122
liver
97
epithelium
94
connective tissue
88
kidney
66
blood vessel
66
vasculature
63
heart
56
adipose tissue
52
artery
48
brain
31
eye
24
limb
12
bone element
12
musculature of body
12
skeleton
11
nerve
8
embryo
8
spleen
6
blood
6
bodily fluid
5
vein
4
gonad
4
ovary
1
lymph node
1
pituitary gland
1
skin of body
Project
12
AMP
Lab
12
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
files.file_type!
bigWig
BIOSAMPLE
ASSAY
12 results
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ChIP-seq
tissue
skeletal muscle tissue
9
muscle of leg
1
primary cell
skeletal muscle cell
1
skeletal muscle satellite cell
1
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