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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
44
ChIP-seq
37
DNase-seq
29
ATAC-seq
25
total RNA-seq
6
Hi-C
6
RRBS
5
pCHi-C
2
small RNA-seq
1
WGBS
1
single cell RNA-seq
1
snATAC-seq
Assay category
44
DNA binding
Target of assay
36
histone
36
histone modification
20
broad histone mark
16
narrow histone mark
7
control
1
RNA binding protein
1
transcription factor
Date released
22
August, 2017
13
June, 2019
7
May, 2019
2
October, 2019
Available data
29
bed narrowPeak
29
bigWig
20
bam
16
bigBed narrowPeak
15
tagAlign
13
bed broadPeak
Organism
44
Homo sapiens
Biosample type
31
tissue
13
primary cell
Organ
552
liver
218
brain
218
pancreas
153
connective tissue
129
epithelium
102
vasculature
99
blood vessel
94
heart
73
adipose tissue
66
limb
60
blood
60
bodily fluid
52
kidney
39
musculature of body
35
nerve
34
artery
22
embryo
20
spleen
17
vein
5
eye
4
gonad
4
ovary
1
lymph node
1
pituitary gland
Project
44
AMP
Genome assembly (visualization)
29
hg19
15
GRCh38
Lab
44
AMP-T2D consortium
Audit category:
8
inconsistent ontology term
BIOSAMPLE
ASSAY
44 results
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Clear Filters
ChIP-seq
tissue
skeletal muscle tissue
22
muscle of leg
7
islet of Langerhans
2
primary cell
skeletal muscle satellite cell
8
retinal pigment epithelial cell
3
skeletal muscle cell
2
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