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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
409
total RNA-seq
257
ChIP-seq
153
ATAC-seq
75
single cell RNA-seq
52
WGBS
41
DNase-seq
15
Hi-C
12
snATAC-seq
10
MeRIP-seq
7
RRBS
4
small RNA-seq
2
Capture-C
2
FAIRE-seq
2
pCHi-C
1
CRISPR genome editing followed by sgRNA sequencing
Assay category
75
Transcription
Date released
37
July, 2018
33
April, 2018
3
August, 2018
1
June, 2018
1
May, 2022
Available data
74
bam
74
bigWig
74
tsv
69
fastq
Organism
75
Homo sapiens
Biosample type
74
primary cell
1
tissue
Organ
93
heart
74
pancreas
70
epithelium
64
kidney
9
lung
6
blood vessel
6
vasculature
4
connective tissue
3
brain
2
artery
1
liver
1
musculature of body
Project
75
AMP
Genome assembly (visualization)
74
GRCh38
74
hg19
Lab
75
AMP-T2D consortium
Audit category:
5
inconsistent ontology term
BIOSAMPLE
ASSAY
75 results
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single cell RNA-seq
primary cell
pancreatic acinar cell
12
pancreatic alpha cell
12
pancreatic beta cell
12
pancreatic delta cell
11
pancreatic ductal cell
10
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tissue
skeletal muscle tissue
1
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