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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
37
ChIP-seq
35
DNase-seq
8
total RNA-seq
2
small RNA-seq
1
ATAC-seq
1
WGBS
Assay category
37
DNA binding
36
DNA accessibility
10
Transcription
1
DNA methylation
Target of assay
37
histone
37
histone modification
24
broad histone mark
13
narrow histone mark
Date released
41
June, 2019
31
October, 2019
5
July, 2019
5
May, 2019
2
March, 2020
Available data
84
bam
84
bigWig
73
bed narrowPeak
72
bigBed narrowPeak
35
bed bed3+
35
bed broadPeak
35
bigBed broadPeak
10
tsv
1
bed bedMethyl
1
bigBed bedMethyl
Organism
84
Homo sapiens
Biosample type
73
tissue
11
primary cell
Organ
635
pancreas
566
connective tissue
531
liver
424
adipose tissue
294
epithelium
226
heart
217
brain
205
kidney
191
vasculature
187
blood vessel
128
artery
96
limb
66
bone element
54
blood
54
bodily fluid
53
musculature of body
31
nerve
29
embryo
18
ureter
16
spleen
12
vein
8
skeleton
6
eye
1
pericardium
1
pituitary gland
Project
84
AMP
Genome assembly (visualization)
104
hg19
84
GRCh38
Lab
84
AMP-T2D consortium
Audit category:
8
inconsistent ontology term
BIOSAMPLE
ASSAY
84 results
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ChIP-seq
DNase-seq
total RNA-seq
small RNA-seq
ATAC-seq
WGBS
tissue
tibial nerve
24
2
4
1
muscle of leg
5
13
1
muscle of arm
17
psoas muscle
2
skeletal muscle tissue
1
1
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primary cell
skeletal muscle satellite cell
7
1
1
skeletal muscle cell
1
1
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