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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
10
ChIP-seq
1
DNase-seq
1
RRBS
1
small RNA-seq
total RNA-seq
Assay category
10
DNA binding
1
DNA accessibility
1
DNA methylation
1
Transcription
Target of assay
8
histone
8
histone modification
4
broad histone mark
4
narrow histone mark
2
control
Date released
11
June, 2019
2
July, 2019
Available data
12
bam
10
bigWig
9
bed narrowPeak
9
bigBed narrowPeak
1
bed bed3+
1
bed bedMethyl
1
bed broadPeak
1
bigBed bedMethyl
1
bigBed broadPeak
1
tsv
Organism
13
Homo sapiens
Biosample type
77
tissue
13
primary cell
Organ
313
epithelium
265
pancreas
35
vasculature
30
kidney
29
blood vessel
29
connective tissue
22
vein
21
brain
13
musculature of body
9
heart
9
liver
8
blood
8
bodily fluid
5
eye
1
adipose tissue
1
bone element
1
bone marrow
Project
13
AMP
Genome assembly (visualization)
11
hg19
10
GRCh38
Lab
13
AMP-T2D consortium
Audit category:
8
inconsistent ontology term
assay_title!
total RNA-seq
BIOSAMPLE
ASSAY
13 results
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ChIP-seq
DNase-seq
RRBS
small RNA-seq
primary cell
skeletal muscle satellite cell
8
1
skeletal muscle cell
2
1
1
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