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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
32
DNase-seq
5
ChIP-seq
3
total RNA-seq
1
WGBS
1
small RNA-seq
Assay category
32
DNA accessibility
5
DNA binding
4
Transcription
1
DNA methylation
Target of assay
5
histone
5
histone modification
4
broad histone mark
1
narrow histone mark
Date released
32
June, 2019
5
May, 2019
3
July, 2019
2
March, 2020
Available data
42
bam
42
bigWig
37
bed narrowPeak
37
bigBed narrowPeak
32
bed bed3+
32
bed broadPeak
32
bigBed broadPeak
4
tsv
1
bed bedMethyl
1
bigBed bedMethyl
Organism
42
Homo sapiens
Biosample type
42
tissue
11
primary cell
Organ
480
connective tissue
422
adipose tissue
386
pancreas
238
liver
203
brain
165
kidney
151
heart
105
blood vessel
105
vasculature
96
limb
66
bone element
62
artery
42
musculature of body
31
nerve
18
ureter
16
spleen
8
skeleton
3
eye
1
pituitary gland
Project
42
AMP
Genome assembly (visualization)
61
hg19
42
GRCh38
Lab
42
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
BIOSAMPLE
ASSAY
42 results
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DNase-seq
ChIP-seq
total RNA-seq
WGBS
small RNA-seq
tissue
muscle of leg
13
5
1
muscle of arm
17
psoas muscle
2
skeletal muscle tissue
1
1
forelimb muscle
1
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