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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
33
DNase-seq
27
ChIP-seq
2
Hi-C
Assay category
33
DNA accessibility
27
DNA binding
2
3D chromatin structure
Target of assay
27
histone
27
histone modification
16
broad histone mark
11
narrow histone mark
Date released
41
June, 2019
13
August, 2017
6
May, 2019
2
March, 2020
Available data
68
bigWig
60
bed narrowPeak
57
bam
47
bigBed narrowPeak
46
bed broadPeak
34
bed bed3+
33
bigBed broadPeak
15
tagAlign
9
tsv
4
bed bedMethyl
4
bigBed bedMethyl
2
bedpe bed3+
2
fastq
2
hic
1
txt
Organism
62
Homo sapiens
Biosample type
53
tissue
9
primary cell
Organ
443
liver
221
pancreas
203
brain
183
kidney
156
epithelium
154
heart
135
vasculature
131
blood vessel
92
limb
76
connective tissue
74
artery
62
musculature of body
54
blood
54
bodily fluid
33
eye
27
nerve
18
ureter
14
adipose tissue
14
embryo
14
spleen
14
vein
8
bone element
8
skeleton
1
pituitary gland
Project
62
AMP
Genome assembly (visualization)
62
hg19
46
GRCh38
Lab
62
AMP-T2D consortium
Audit category:
8
inconsistent ontology term
BIOSAMPLE
ASSAY
62 results
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DNase-seq
ChIP-seq
Hi-C
tissue
muscle of leg
13
6
muscle of arm
17
skeletal muscle tissue
13
psoas muscle
2
forelimb muscle
1
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primary cell
skeletal muscle satellite cell
7
skeletal muscle cell
1
1
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