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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
49
DNase-seq
6
ChIP-seq
Assay category
49
DNA accessibility
6
DNA binding
Target of assay
4
histone
4
histone modification
2
RNA binding protein
2
broad histone mark
2
narrow histone mark
2
transcription factor
Date released
47
June, 2019
4
November, 2017
4
October, 2019
Available data
374
bam
369
bigWig
259
fastq
211
bed narrowPeak
165
tsv
123
bigBed narrowPeak
80
zippedFastqFolder
68
bed broadPeak
55
bed bed3+
55
bigBed broadPeak
22
tagAlign
10
bed bedMethyl
10
bigBed bedMethyl
8
hic
7
bedpe bed3+
3
cool
2
hdf5
1
tar
1
txt
Organism
55
Homo sapiens
Biosample type
32
tissue
23
primary cell
Organ
78
kidney
63
liver
38
brain
36
limb
33
musculature of body
30
heart
22
epithelium
18
ureter
17
vasculature
13
blood vessel
9
connective tissue
7
pancreas
4
artery
4
eye
4
vein
2
adipose tissue
2
nerve
1
spleen
Project
55
AMP
Genome assembly (visualization)
53
GRCh38
49
hg19
Lab
55
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
BIOSAMPLE
ASSAY
55 results
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DNase-seq
ChIP-seq
tissue
muscle of arm
17
muscle of leg
13
forelimb muscle
1
hindlimb muscle
1
primary cell
endothelial cell of umbilical vein
2
2
brain microvascular endothelial cell
1
2
choroid plexus epithelial cell
1
2
glomerular visceral epithelial cell
2
kidney tubule cell
2
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