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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
33
DNase-seq
21
ChIP-seq
4
total RNA-seq
2
small RNA-seq
1
ATAC-seq
1
WGBS
Assay category
34
DNA accessibility
21
DNA binding
6
Transcription
1
DNA methylation
Target of assay
21
histone
21
histone modification
12
broad histone mark
9
narrow histone mark
Date released
41
June, 2019
13
August, 2017
May, 2019
5
July, 2019
2
March, 2020
1
January, 2018
Available data
62
bigWig
54
bed narrowPeak
50
bam
46
bed broadPeak
41
bigBed narrowPeak
34
bed bed3+
33
bigBed broadPeak
15
tagAlign
9
tsv
4
bed bedMethyl
4
bigBed bedMethyl
2
bedpe bed3+
2
fastq
2
hic
1
txt
Organism
62
Homo sapiens
Biosample type
51
tissue
11
primary cell
Organ
622
liver
622
pancreas
570
connective tissue
425
adipose tissue
297
epithelium
197
brain
169
heart
127
kidney
116
vasculature
111
blood vessel
85
limb
82
artery
62
musculature of body
58
bone element
55
blood
55
bodily fluid
31
nerve
29
embryo
18
ureter
16
spleen
15
vein
6
eye
1
pericardium
1
pituitary gland
Project
62
AMP
Genome assembly (visualization)
61
hg19
48
GRCh38
Lab
62
AMP-T2D consortium
Audit category:
8
inconsistent ontology term
month_released!
May, 2019
BIOSAMPLE
ASSAY
62 results
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DNase-seq
ChIP-seq
total RNA-seq
small RNA-seq
ATAC-seq
WGBS
tissue
muscle of arm
17
skeletal muscle tissue
13
1
1
1
muscle of leg
13
1
psoas muscle
2
forelimb muscle
1
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primary cell
skeletal muscle satellite cell
7
1
1
skeletal muscle cell
1
1
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