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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
33
DNase-seq
32
ChIP-seq
4
total RNA-seq
2
small RNA-seq
1
WGBS
Assay category
33
DNA accessibility
32
DNA binding
6
Transcription
1
DNA methylation
Target of assay
27
histone
27
histone modification
16
broad histone mark
11
narrow histone mark
5
control
Date released
43
June, 2019
15
August, 2017
7
May, 2019
5
July, 2019
2
March, 2020
Available data
68
bigWig
60
bed narrowPeak
57
bam
47
bigBed narrowPeak
46
bed broadPeak
34
bed bed3+
33
bigBed broadPeak
15
tagAlign
9
tsv
4
bed bedMethyl
4
bigBed bedMethyl
2
bedpe bed3+
2
fastq
2
hic
1
txt
Organism
72
Homo sapiens
Biosample type
59
tissue
13
primary cell
Organ
701
liver
698
pancreas
615
connective tissue
450
adipose tissue
317
epithelium
261
brain
211
heart
185
vasculature
180
blood vessel
144
kidney
114
limb
102
artery
72
musculature of body
66
bone element
60
blood
60
bodily fluid
42
nerve
36
embryo
24
spleen
20
vein
18
ureter
8
skeleton
7
eye
1
pericardium
1
pituitary gland
Project
72
AMP
Genome assembly (visualization)
66
hg19
53
GRCh38
Lab
72
AMP-T2D consortium
Audit category:
9
inconsistent ontology term
BIOSAMPLE
ASSAY
72 results
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DNase-seq
ChIP-seq
total RNA-seq
small RNA-seq
WGBS
tissue
muscle of leg
13
7
1
muscle of arm
17
skeletal muscle tissue
15
1
1
psoas muscle
2
forelimb muscle
1
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primary cell
skeletal muscle satellite cell
8
1
1
skeletal muscle cell
1
2
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