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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
33
DNase-seq
27
ChIP-seq
1
snATAC-seq
Assay category
34
DNA accessibility
27
DNA binding
Target of assay
27
histone
27
histone modification
16
broad histone mark
11
narrow histone mark
Date released
41
June, 2019
13
August, 2017
6
May, 2019
1
May, 2022
Available data
68
bigWig
60
bed narrowPeak
57
bam
47
bigBed narrowPeak
46
bed broadPeak
34
bed bed3+
33
bigBed broadPeak
15
tagAlign
9
tsv
4
bed bedMethyl
4
bigBed bedMethyl
2
bedpe bed3+
2
fastq
2
hic
1
txt
Organism
61
Homo sapiens
Biosample type
52
tissue
9
primary cell
Organ
441
liver
245
kidney
220
pancreas
203
brain
191
heart
151
epithelium
133
vasculature
129
blood vessel
96
bone element
92
limb
75
connective tissue
74
artery
61
musculature of body
54
blood
54
bodily fluid
33
eye
27
nerve
18
ureter
14
embryo
14
spleen
13
adipose tissue
13
vein
12
skeleton
1
pituitary gland
Project
61
AMP
Genome assembly (visualization)
61
hg19
46
GRCh38
Lab
61
AMP-T2D consortium
Audit category:
8
inconsistent ontology term
1
audit script error
organ_slims!
gonad
BIOSAMPLE
ASSAY
61 results
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DNase-seq
ChIP-seq
snATAC-seq
tissue
muscle of leg
13
6
muscle of arm
17
skeletal muscle tissue
13
1
forelimb muscle
1
hindlimb muscle
1
primary cell
skeletal muscle satellite cell
7
skeletal muscle cell
1
1
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