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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
4
Hi-C
3
ChIP-seq
2
total RNA-seq
1
WGBS
1
pCHi-C
1
single cell RNA-seq
Assay category
4
3D chromatin structure
3
DNA binding
3
Transcription
1
DNA methylation
Target of assay
3
control
Date released
August, 2017
5
July, 2019
2
February, 2020
2
June, 2019
1
March, 2020
1
May, 2019
1
May, 2022
Available data
4
bam
3
tsv
1
bed bedMethyl
1
bigBed bedMethyl
1
bigWig
Organism
12
Homo sapiens
Biosample type
10
tissue
2
primary cell
Organ
259
pancreas
225
kidney
205
heart
201
epithelium
liver
122
brain
89
bone element
71
blood vessel
71
vasculature
48
artery
34
connective tissue
27
eye
26
limb
23
adipose tissue
20
lung
14
blood
14
bodily fluid
12
musculature of body
12
nerve
11
spleen
8
embryo
5
gonad
5
ovary
5
vein
4
skeleton
2
intestine
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
12
AMP
Genome assembly (visualization)
hg19
53
GRCh38
Lab
12
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
organ_slims!
liver
month_released!
August, 2017
assembly!
hg19
BIOSAMPLE
ASSAY
12 results
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Clear Filters
Hi-C
ChIP-seq
total RNA-seq
WGBS
pCHi-C
single cell RNA-seq
tissue
gastrocnemius medialis
4
1
muscle of leg
1
1
left ventricle myocardium
1
psoas muscle
1
skeletal muscle tissue
1
primary cell
skeletal muscle cell
1
skeletal muscle satellite cell
1
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