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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
22
ChIP-seq
5
RRBS
4
Hi-C
2
small RNA-seq
2
total RNA-seq
1
WGBS
Assay category
22
DNA binding
6
DNA methylation
4
3D chromatin structure
4
Transcription
Target of assay
19
histone
19
histone modification
12
broad histone mark
7
narrow histone mark
3
control
Date released
43
June, 2019
26
August, 2017
10
July, 2019
7
May, 2019
5
March, 2020
2
February, 2020
2
May, 2022
1
January, 2018
Available data
18
bigWig
15
tagAlign
13
bed broadPeak
13
bed narrowPeak
5
bam
4
bed bedMethyl
4
bigBed bedMethyl
4
tsv
2
fastq
Organism
36
Homo sapiens
Biosample type
33
tissue
3
primary cell
Organ
194
pancreas
143
connective tissue
69
adipose tissue
64
liver
42
epithelium
36
musculature of body
25
heart
18
brain
12
vasculature
11
blood vessel
11
kidney
5
limb
3
artery
pericardium
1
eye
Project
36
AMP
Genome assembly (visualization)
20
hg19
5
GRCh38
Lab
36
AMP-T2D consortium
organ_slims!
pericardium
BIOSAMPLE
ASSAY
36 results
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ChIP-seq
RRBS
Hi-C
small RNA-seq
total RNA-seq
WGBS
tissue
skeletal muscle tissue
22
4
1
1
gastrocnemius medialis
4
muscle of leg
1
primary cell
skeletal muscle satellite cell
1
1
skeletal muscle cell
1
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