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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
62
ChIP-seq
Assay category
62
DNA binding
Target of assay
338
transcription factor
136
histone modification
135
histone
114
control
82
recombinant protein
73
narrow histone mark
62
broad histone mark
58
RNA binding protein
23
chromatin remodeller
2
other context
2
other post-translational modification
Date released
31
August, 2017
10
December, 2017
8
November, 2017
4
June, 2019
4
May, 2019
3
October, 2019
2
August, 2021
Available data
46
bigWig
45
bed narrowPeak
37
bam
29
bigBed narrowPeak
26
tagAlign
25
fastq
16
bed broadPeak
8
bigBed broadPeak
1
bed bed3+
Organism
62
Homo sapiens
Biosample type
41
tissue
9
cell line
7
in vitro differentiated cells
5
primary cell
Organ
78
pancreas
70
brain
57
heart
45
blood vessel
45
vasculature
44
connective tissue
44
epithelium
42
liver
34
limb
20
adipose tissue
20
musculature of body
16
nerve
15
kidney
14
artery
9
vein
4
embryo
4
spleen
Project
62
AMP
Genome assembly (visualization)
46
hg19
36
GRCh38
Lab
61
AMP-T2D consortium
1
Bing Ren, UCSD
Audit category:
4
inconsistent ontology term
Audit category:
6
inconsistent control read length
organ_slims!
thymus
BIOSAMPLE
ASSAY
62 results
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Clear Filters
ChIP-seq
tissue
liver
22
skeletal muscle tissue
12
muscle of leg
4
right lobe of liver
3
cell line
HepG2
9
in vitro differentiated cells
hepatocyte
7
primary cell
skeletal muscle satellite cell
4
hepatocyte
1
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