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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
72
ChIP-seq
6
WGBS
4
RRBS
2
ATAC-seq
Assay category
72
DNA binding
10
DNA methylation
2
DNA accessibility
Target of assay
51
histone
51
histone modification
32
broad histone mark
19
narrow histone mark
12
transcription factor
9
control
Date released
386
February, 2021
83
August, 2017
44
June, 2019
23
October, 2018
22
July, 2019
7
May, 2019
6
March, 2020
4
February, 2020
2
January, 2018
2
May, 2022
1
August, 2018
1
August, 2021
1
February, 2023
1
May, 2023
1
November, 2018
1
November, 2019
1
October, 2017
1
October, 2019
Available data
30
bigWig
23
tagAlign
20
fastq
18
bam
17
bed narrowPeak
14
bed broadPeak
4
bed bed3+
4
bed bedMethyl
4
bigBed bedMethyl
2
bigBed narrowPeak
Organism
84
Homo sapiens
Biosample type
84
tissue
Organ
243
pancreas
126
connective tissue
58
adipose tissue
54
liver
45
epithelium
26
musculature of body
Project
84
AMP
Genome assembly (visualization)
31
hg19
17
GRCh38
Lab
84
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
Audit category:
12
missing controlled_by
BIOSAMPLE
ASSAY
84 results
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ChIP-seq
WGBS
RRBS
ATAC-seq
tissue
subcutaneous abdominal adipose tissue
36
3
skeletal muscle tissue
22
4
white adipose tissue
12
adipose tissue
2
3
adipose tissue(adipose white tissue)
1
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