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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
36
DNase-seq
4
ChIP-seq
1
snATAC-seq
Assay category
37
DNA accessibility
4
DNA binding
Target of assay
4
transcription factor
Date released
34
June, 2019
4
August, 2017
2
November, 2018
1
May, 2022
Available data
523
bam
509
bigWig
411
tsv
87
bed narrowPeak
70
bigBed narrowPeak
70
fastq
50
bed broadPeak
41
bed bed3+
36
bigBed broadPeak
23
tagAlign
8
bed bedMethyl
8
bigBed bedMethyl
3
bedpe bed3+
2
hic
1
txt
Organism
41
Homo sapiens
Biosample type
40
tissue
1
primary cell
Organ
78
kidney
36
limb
35
brain
34
musculature of body
30
heart
29
pancreas
27
connective tissue
21
epithelium
18
ureter
13
liver
13
vasculature
11
blood vessel
6
adipose tissue
4
artery
4
eye
3
embryo
2
nerve
2
vein
1
spleen
Project
41
AMP
Genome assembly (visualization)
41
hg19
40
GRCh38
Lab
41
AMP-T2D consortium
Audit category:
1
audit script error
1
inconsistent ontology term
Audit category:
4
missing controlled_by
BIOSAMPLE
ASSAY
41 results
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DNase-seq
ChIP-seq
snATAC-seq
tissue
muscle of arm
17
muscle of leg
13
white adipose tissue
4
omental fat pad
2
forelimb muscle
1
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primary cell
skeletal muscle cell
1
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