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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
62
total RNA-seq
33
DNase-seq
13
ChIP-seq
8
ATAC-seq
2
small RNA-seq
1
WGBS
Assay category
64
Transcription
41
DNA accessibility
13
DNA binding
1
DNA methylation
Target of assay
13
histone
13
histone modification
8
broad histone mark
5
narrow histone mark
Date released
66
February, 2021
41
June, 2019
5
July, 2019
5
May, 2019
2
March, 2020
Available data
119
bam
111
bigWig
64
tsv
54
bed narrowPeak
46
bigBed narrowPeak
33
bed bed3+
33
bed broadPeak
33
bigBed broadPeak
1
bed bedMethyl
1
bigBed bedMethyl
Organism
119
Homo sapiens
Biosample type
108
tissue
11
primary cell
Organ
635
pancreas
566
connective tissue
531
liver
424
adipose tissue
294
epithelium
226
heart
217
brain
205
kidney
191
vasculature
187
blood vessel
128
artery
96
limb
66
bone element
54
blood
54
bodily fluid
53
musculature of body
31
nerve
29
embryo
18
ureter
16
spleen
12
vein
8
skeleton
6
eye
1
pericardium
1
pituitary gland
Project
119
AMP
Genome assembly (visualization)
143
hg19
119
GRCh38
Lab
119
AMP-T2D consortium
Audit category:
8
inconsistent ontology term
BIOSAMPLE
ASSAY
119 results
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total RNA-seq
DNase-seq
ChIP-seq
ATAC-seq
small RNA-seq
WGBS
tissue
bone tissue
58
muscle of leg
13
5
1
muscle of arm
17
psoas muscle
2
skeletal muscle tissue
1
1
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primary cell
skeletal muscle satellite cell
1
7
1
skeletal muscle cell
1
1
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