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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
8
ChIP-seq
1
DNase-seq
1
small RNA-seq
1
total RNA-seq
Assay category
8
DNA binding
2
Transcription
1
DNA accessibility
Target of assay
8
histone
8
histone modification
4
broad histone mark
4
narrow histone mark
Date released
9
June, 2019
2
July, 2019
Available data
11
bam
11
bigWig
9
bed narrowPeak
9
bigBed narrowPeak
2
tsv
1
bed bed3+
1
bed broadPeak
1
bigBed broadPeak
Organism
11
Homo sapiens
Biosample type
tissue
11
primary cell
Organ
294
epithelium
293
liver
249
pancreas
86
connective tissue
86
vasculature
82
blood vessel
75
heart
66
artery
54
blood
54
bodily fluid
40
kidney
29
embryo
14
brain
12
vein
11
musculature of body
3
eye
2
adipose tissue
1
pericardium
0
bone element
Project
11
AMP
Genome assembly (visualization)
12
hg19
11
GRCh38
Lab
11
AMP-T2D consortium
Audit category:
7
inconsistent ontology term
biosample_type!
tissue
BIOSAMPLE
ASSAY
11 results
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ChIP-seq
DNase-seq
small RNA-seq
total RNA-seq
primary cell
skeletal muscle satellite cell
7
1
1
skeletal muscle cell
1
1
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